Neonatal Infectious Diseases/Immunology 4: Immunity in early life
Session: Neonatal Infectious Diseases/Immunology 4: Immunity in early life
Devashis Mukherjee, MD, MS (he/him/his)
Assistant Professor
Case Western Reserve University School of Medicine
Cleveland, Ohio, United States
Figure 1. (A) shows Western blots of cell lysate and supernatants from bone marrow neutrophils isolated from P5, P12, and adult (8-week) C57Bl/6 mice and treated with 500ng/mL of E. coli LPS for 3 hours to prime the NLRP3 inflammasome, and then 30 mins of nigericin 20uM to activate the NLRP3 assembly. Activation of the NLRP3 inflammasome leads to cleavage of full-length gasdermin D (FL-GSDMD) to N-terminal GSDMD (NT-GSDMD), which is increased at an earlier postnatal age. NT-GSDMD leads to pore formation and release of cleaved IL-1β into the supernatant, which is also increased at an earlier postnatal age as depicted by western blots of protein precipitated from the supernatant. (B) shows ELISA results from the supernatant, demonstrating increased IL-1β released by neutrophils at an earlier postnatal age. N=2 for each and hence statistical analysis was not performed.
Figure 2. Total RNA was isolated from bone marrow neutrophils from P5, P12, and adult (8-week-old) C57Bl/6 mice (n=7 for P5, P12, and n=6 for adult), used to prepare libraries and run on the NovaSeqX Illumina platform after RNA quantification. Differentially expressed genes were identified using a significance cutoff of q-value < 0.05, subjected to gene enrichment analysis, and cross-referenced using the Gene Ontology database. Additional pathway analysis was performed using iPathwayGuide (Advaita Bio). (A) shows a heatmap of the top 5000 DEGs across all ages, (B) shows the principal component analysis depicting the distinct neutrophil transcriptome at each age, and (C) shows the top 5 biological processes affected in the transcriptomic meta-analysis when selecting for DEGs significant between adult vs. P12 and adult vs. P4 ages.